What is the relationship between sam bam and bai


Discussion Post

• What is CIGAR string? How is it generated and where will you find it?

• What is BAI file and how is it made? Be specific?

• Compare and contrast FASTA and FASTQ files

• What is the relationship between SAM,BAM, and BAI? how is each of these generated? What information do they contain and why are they useful?

• Using pseudocode, describe an algorithm that searches for all instances of ATC in a given sequence. What do you think the BigO will be for this algorithm and why?

The response must include a reference list. Using Times New Roman 12 pnt font, double-space, one-inch margins, and APA style of writing and citations.

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