--%>
Assignment Help - homework help

Determine sequence weights

Determine sequence weights for the sequences ACTA, ACTT, CGTT, and AGAT in problem 1 by using Thompson, Higgins, and Gibson method

a) compute pairwise distances between sequences

b) build phylogenetic the tree using UPGMA method 

c) derive sequence weights 

Problem 2

We assumed additive property when constructed UPGMA tree  in problem 1.

What is limitation of this assumption?

Problem 3

The sequence of gene "B3" was used to blast against swissprot protein database. The query returned five significant hits to other proteins denoted by B1,B2,B4, B5, and H in the figure below. B1-B5 are five bacterial species, while the species H represents Homo sapiens. No other mammalian species have shown presence of protein that is similar to B3. Explain the presence of this gene in humans.

851_sequence-weight.png

 

Problem 4

Describe technical and theoretical challenges associated with building phylogenetic trees.

   Related Questions in Biology

  • Q : Define Strategic Planning Strategic

    Strategic Planning: It is the procedure by which an organization visualizes its future and develops the essential procedures and operations to attain that future. The fundamental steps of the strategic planning procedure comprise information analysis

    		•
  • Q : What is Management Development

    Management Development: It is the aspect of organizational development which covers assessment and recruitment of executive level employees and trains them in leadership to furnish them for higher positions. This process usually comprises development

    		•
  • Q : Macro and micronutrients Explain the

    Explain the difference between macro and micronutrients?

    		•
  • Q : Define Position Classification Position

    Position Classification: It is a first and foremost way to make sure equivalent pay for substantially equivalent work. The classification system and standards are tools for assisting management in achieving the agency's mission. This assists in manage

    		•
  • Q : Twins Explain the twins? Genetically,

    Explain the twins? Genetically, which are the two types of twins which can be generated?

    		•
  • Q : Chemical reaction involved in digestion

    Which type of chemical reaction involves breaking down of the macromolecules in smaller ones which occurs in the digestion? Specify some of the enzymes which performs this process?

    		•
  • Q : Etiological agent of cutaneous

    Write down the etiological agent of the cutaneous leishmaniasis? How disease transmitted and what are its typical manifestations?

    		•
  • Q : Example of human cells that produce

    Write down the some examples of human cells which produce proteins for exportation? Which cytoplasmic organelle is anticipated to be well-developed and profuse in those cells?

    		•
  • Q : Differentiation between habitat and

    Write down the differentiation between habitat and ecological niche.

    		•
  • Q : Define antigenic determinant What do

    What do you meant by the term antigenic determinant?

    		•